Sequence Extract
Sequence Extract will retrieve sequences from the TAIR12 reference by coordinate range or feature identifier. The tool should support reproducible downloads and clear sequence headers that preserve the genome release, feature ID, and interval.
Planned Sequence Types
- Genomic interval sequence
- Gene sequence
- Transcript sequence
- CDS sequence
- Protein sequence
- Upstream promoter sequence
- UTR and flanking sequence
Required Inputs
| Input | Status |
|---|---|
| Locus or feature ID | TBD supported identifier examples |
| Genomic interval | TBD coordinate format and maximum interval length |
| Sequence type | TBD final menu options |
| Strand handling | TBD reverse-complement behavior |
Implementation placeholder: connect this page to the final
TAIR12 FASTA files and extraction service.